Operation: measure mean diameter

measure mean diameter operation

Author:

Volker Bäcker

Example

input mask    input skeleton
control image    result

Description

The operation takes a mask and a skeleton and estimates the mean diameter of the structure in the mask image. Areas around branching points are not taken into account. 

Options

options
max joint radius: The radius of the circle that will be deleted around each branching point.

Parameter

inputImage (ImagePlus): The mask of the structure to me measured.
skeleton (ImagePlus): A skeleton of the input mask.

Results

result (ImagePlus): An image that indicates the parts of the mask that have been taken into account for the calculation.
meanThickness (ResultsTable): A results table containing the estimated mean thickness of the structure in the mask image.